Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 AC138028.6-201ENST00000616106 1482 ntBASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL27A1Q8IZC6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AC079178.1-201ENST00000420915 656 ntBASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AL391280.1-201ENST00000506969 1062 ntBASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AC106872.11-201ENST00000605838 421 ntBASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AL645728.2-202ENST00000641679 227 ntBASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 PRSS30P-206ENST00000641773 873 ntBASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL27A1Q8IZC6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AL138799.1-201ENST00000448213 1675 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AC005332.8-201ENST00000622750 2735 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 KRT8P14-201ENST00000414254 1442 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AL354877.1-201ENST00000424412 413 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 EIF4HP1-201ENST00000453115 687 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms