Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM42Q8IWZ5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM42Q8IWZ5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM42Q8IWZ5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 FAAHP1-202ENST00000446499 1238 ntBASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 AC245100.5-201ENST00000452108 331 ntBASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 AC021097.1-201ENST00000607902 574 ntBASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 LINC01101-201ENST00000622953 1884 ntBASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM42Q8IWZ5 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms