Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 AC126755.1-201ENST00000525846 6405 ntBASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 AL139010.1-201ENST00000454878 894 ntBASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM48Q8IWZ4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AC067930.6-201ENST00000623257 4947 ntBASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 MIR4321-201ENST00000592276 80 ntBASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AL590560.3-201ENST00000623350 461 ntBASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AC005052.1-201ENST00000625181 2492 ntBASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM48Q8IWZ4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM48Q8IWZ4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms