Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 AL355864.2-201ENST00000447420 863 ntBASIC17.28■□□□□ 0.36
HERC6Q8IVU3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC6Q8IVU3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 MIR1247-201ENST00000408206 136 ntBASIC17.27■□□□□ 0.36
HERC6Q8IVU3 GPAA1P2-201ENST00000417923 928 ntBASIC17.27■□□□□ 0.36
HERC6Q8IVU3 YBX1P6-201ENST00000442962 1002 ntBASIC17.27■□□□□ 0.36
HERC6Q8IVU3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 AC010328.2-201ENST00000597698 1111 ntBASIC17.27■□□□□ 0.36
HERC6Q8IVU3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC6Q8IVU3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 AC005622.1-201ENST00000636801 1703 ntBASIC17.27■□□□□ 0.35
HERC6Q8IVU3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC6Q8IVU3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
HERC6Q8IVU3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC6Q8IVU3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms