Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LRRTM1Q86UE6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 LINC01101-201ENST00000622953 1884 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 SAPCD2P3-201ENST00000455031 850 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AC091304.2-201ENST00000564639 760 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 MIR3652-201ENST00000579335 131 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AC004790.2-201ENST00000623588 572 ntBASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRRTM1Q86UE6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AC134407.2-201ENST00000625089 1978 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AC009090.5-201ENST00000624886 2285 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AC108073.2-201ENST00000464002 357 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AL031432.2-201ENST00000566714 459 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AL928711.1-201ENST00000570165 459 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 MIR4321-201ENST00000592276 80 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AL356488.2-201ENST00000602755 427 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 MIR1199-201ENST00000621445 119 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 AL645728.2-201ENST00000641974 660 ntBASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRTM1Q86UE6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms