Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 IGHV3-62-201ENST00000520057 340 ntBASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 RFPL4AP1-201ENST00000530883 850 ntBASIC14.81□□□□□ -0.04
ZNF550Q7Z398 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AC004835.2-201ENST00000603762 682 ntBASIC14.81□□□□□ -0.04
ZNF550Q7Z398 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AL513210.1-201ENST00000629608 234 ntBASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 AC105339.1-204ENST00000636249 355 ntBASIC14.81□□□□□ -0.04
ZNF550Q7Z398 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF550Q7Z398 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AL645939.2-201ENST00000427340 991 ntBASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 CYMP-203ENST00000474680 1263 ntBASIC14.8□□□□□ -0.04
ZNF550Q7Z398 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 KRT8P23-201ENST00000560090 1207 ntBASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 AC022145.2-201ENST00000598203 171 ntBASIC14.8□□□□□ -0.04
ZNF550Q7Z398 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.8□□□□□ -0.04
ZNF550Q7Z398 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF550Q7Z398 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms