Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF20Q5VTR2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 BNIP3P1-202ENST00000550043 1585 ntBASIC19.16■□□□□ 0.66
RNF20Q5VTR2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 AL627223.1-201ENST00000416693 442 ntBASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 AC004835.2-201ENST00000603762 682 ntBASIC19.16■□□□□ 0.66
RNF20Q5VTR2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF20Q5VTR2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF20Q5VTR2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF20Q5VTR2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms