Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC067930.6-201ENST00000623257 4947 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 ELK2BP-201ENST00000415014 1224 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC087163.2-201ENST00000457299 853 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AF238378.1-201ENST00000526806 358 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC021087.4-201ENST00000563761 564 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 CLEC4GP1-201ENST00000596555 870 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 IFNL4P1-201ENST00000607083 540 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC107918.4-202ENST00000641623 219 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 AC006449.6-201ENST00000612330 2296 ntBASIC15.55■□□□□ 0.08
RNF220Q5VTB9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF220Q5VTB9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 AC016027.1-202ENST00000607927 1699 ntBASIC15.54■□□□□ 0.08
RNF220Q5VTB9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PTCHD3P3-201ENST00000403073 906 ntBASIC15.54■□□□□ 0.08
RNF220Q5VTB9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF220Q5VTB9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 AC002310.6-201ENST00000624451 1377 ntBASIC15.53■□□□□ 0.08
RNF220Q5VTB9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 AC012313.10-201ENST00000623509 926 ntBASIC15.53■□□□□ 0.08
RNF220Q5VTB9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 AC006504.4-201ENST00000592118 1568 ntBASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF220Q5VTB9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.53■□□□□ 0.08
RNF220Q5VTB9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms