Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC097065.1-201ENST00000425737 517 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 DDX39AP1-201ENST00000445147 1181 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 RN7SL596P-201ENST00000582123 288 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRRK2Q5S007 AC004899.1-201ENST00000424687 1714 ntBASIC13.67□□□□□ -0.22
LRRK2Q5S007 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRK2Q5S007 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 TNXA-203ENST00000507684 2038 ntBASIC13.66□□□□□ -0.22
LRRK2Q5S007 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AC005622.1-201ENST00000636801 1703 ntBASIC13.66□□□□□ -0.22
LRRK2Q5S007 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 BNIP3P1-202ENST00000550043 1585 ntBASIC13.66□□□□□ -0.22
LRRK2Q5S007 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AP001527.2-201ENST00000614441 631 ntBASIC13.66□□□□□ -0.22
LRRK2Q5S007 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRK2Q5S007 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRK2Q5S007 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 RPS9P1-201ENST00000419943 583 ntBASIC13.65□□□□□ -0.22
LRRK2Q5S007 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC025271.4-201ENST00000621477 1726 ntBASIC13.65□□□□□ -0.22
LRRK2Q5S007 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC004408.2-201ENST00000623613 2777 ntBASIC13.65□□□□□ -0.22
LRRK2Q5S007 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.65□□□□□ -0.22
LRRK2Q5S007 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms