Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RSPO4Q2I0M5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 ACKR1-201ENST00000368121 1240 ntBASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC013467.2-201ENST00000605472 835 ntBASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 CASP16P-204ENST00000635032 809 ntBASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RSPO4Q2I0M5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SLC25A1P3-201ENST00000395415 828 ntBASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 RN7SL736P-201ENST00000613111 269 ntBASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AP000346.4-201ENST00000614827 381 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms