Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH17Q12864 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH17Q12864 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH17Q12864 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH17Q12864 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH17Q12864 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 AC022145.2-201ENST00000598203 171 ntBASIC16.21■□□□□ 0.19
CDH17Q12864 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 AC092384.3-202ENST00000564646 2873 ntBASIC16.21■□□□□ 0.19
CDH17Q12864 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH17Q12864 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH17Q12864 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH17Q12864 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDH17Q12864 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 AL136982.4-201ENST00000437689 1740 ntBASIC16.2■□□□□ 0.18
CDH17Q12864 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 YBX1P5-201ENST00000509441 847 ntBASIC16.2■□□□□ 0.18
CDH17Q12864 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 RARRES2P9-201ENST00000565168 469 ntBASIC16.2■□□□□ 0.18
CDH17Q12864 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH17Q12864 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.2■□□□□ 0.18
CDH17Q12864 AC026979.3-201ENST00000607315 403 ntBASIC16.2■□□□□ 0.18
CDH17Q12864 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH17Q12864 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 REXO1L1P-202ENST00000608646 1974 ntBASIC16.2■□□□□ 0.18
CDH17Q12864 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH17Q12864 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH17Q12864 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDH17Q12864 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH17Q12864 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 CICP13-201ENST00000422015 2789 ntBASIC16.19■□□□□ 0.18
CDH17Q12864 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 AC005237.2-201ENST00000434368 219 ntBASIC16.19■□□□□ 0.18
CDH17Q12864 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH17Q12864 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH17Q12864 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH17Q12864 MIR4469-201ENST00000583919 79 ntBASIC16.19■□□□□ 0.18
CDH17Q12864 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH17Q12864 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 AL513210.1-201ENST00000629608 234 ntBASIC16.19■□□□□ 0.18
CDH17Q12864 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH17Q12864 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH17Q12864 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms