Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DDR1Q08345 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC091046.1-201ENST00000331871 207 ntBASIC19.63■□□□□ 0.73
DDR1Q08345 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.63■□□□□ 0.73
DDR1Q08345 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.63■□□□□ 0.73
DDR1Q08345 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 AC020914.3-201ENST00000594712 304 ntBASIC19.63■□□□□ 0.73
DDR1Q08345 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC132938.4-201ENST00000623835 848 ntBASIC19.63■□□□□ 0.73
DDR1Q08345 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 AC006453.4-201ENST00000636949 1252 ntBASIC19.63■□□□□ 0.73
DDR1Q08345 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDR1Q08345 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.63■□□□□ 0.73
DDR1Q08345 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.63■□□□□ 0.73
DDR1Q08345 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DDR1Q08345 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.62■□□□□ 0.73
DDR1Q08345 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
DDR1Q08345 AL662890.1-201ENST00000396818 632 ntBASIC19.62■□□□□ 0.73
DDR1Q08345 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.62■□□□□ 0.73
DDR1Q08345 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.62■□□□□ 0.73
DDR1Q08345 RNA5SP486-201ENST00000515961 83 ntBASIC19.62■□□□□ 0.73
DDR1Q08345 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.62■□□□□ 0.73
DDR1Q08345 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.62■□□□□ 0.73
DDR1Q08345 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DDR1Q08345 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.62■□□□□ 0.73
DDR1Q08345 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
DDR1Q08345 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDR1Q08345 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.61■□□□□ 0.73
DDR1Q08345 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.61■□□□□ 0.73
DDR1Q08345 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 KRT8P35-201ENST00000483942 1338 ntBASIC19.61■□□□□ 0.73
DDR1Q08345 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.61■□□□□ 0.73
DDR1Q08345 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDR1Q08345 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.61■□□□□ 0.73
DDR1Q08345 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.61■□□□□ 0.73
DDR1Q08345 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.61■□□□□ 0.73
DDR1Q08345 UPF3AP2-201ENST00000457924 1132 ntBASIC19.61■□□□□ 0.73
DDR1Q08345 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.61■□□□□ 0.73
DDR1Q08345 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
DDR1Q08345 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms