Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
GABPAQ06546 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
GABPAQ06546 AC106886.1-201ENST00000568660 600 ntBASIC18.68■□□□□ 0.58
GABPAQ06546 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.68■□□□□ 0.58
GABPAQ06546 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
GABPAQ06546 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GABPAQ06546 AL162274.1-201ENST00000617191 1098 ntBASIC18.68■□□□□ 0.58
GABPAQ06546 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.67■□□□□ 0.58
GABPAQ06546 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.67■□□□□ 0.58
GABPAQ06546 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.67■□□□□ 0.58
GABPAQ06546 AC104596.2-201ENST00000512793 793 ntBASIC18.67■□□□□ 0.58
GABPAQ06546 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.67■□□□□ 0.58
GABPAQ06546 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.67■□□□□ 0.58
GABPAQ06546 AL033527.5-201ENST00000641382 801 ntBASIC18.67■□□□□ 0.58
GABPAQ06546 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GABPAQ06546 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABPAQ06546 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.66■□□□□ 0.58
GABPAQ06546 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.66■□□□□ 0.58
GABPAQ06546 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.66■□□□□ 0.58
GABPAQ06546 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.66■□□□□ 0.58
GABPAQ06546 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GABPAQ06546 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.66■□□□□ 0.58
GABPAQ06546 TMEM14DP-201ENST00000422205 345 ntBASIC18.66■□□□□ 0.58
GABPAQ06546 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.66■□□□□ 0.58
GABPAQ06546 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.66■□□□□ 0.58
GABPAQ06546 FAM86LP-201ENST00000478302 853 ntBASIC18.66■□□□□ 0.58
GABPAQ06546 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.66■□□□□ 0.58
GABPAQ06546 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.66■□□□□ 0.58
GABPAQ06546 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.66■□□□□ 0.58
GABPAQ06546 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GABPAQ06546 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABPAQ06546 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.66■□□□□ 0.58
GABPAQ06546 AC069224.1-201ENST00000566372 1715 ntBASIC18.66■□□□□ 0.58
GABPAQ06546 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
GABPAQ06546 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.65■□□□□ 0.58
GABPAQ06546 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GABPAQ06546 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.65■□□□□ 0.58
GABPAQ06546 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GABPAQ06546 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABPAQ06546 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABPAQ06546 LTB4R2-202ENST00000528054 3092 ntBASIC18.65■□□□□ 0.58
GABPAQ06546 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABPAQ06546 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABPAQ06546 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GABPAQ06546 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABPAQ06546 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.65■□□□□ 0.58
GABPAQ06546 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms