Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
IRX3P78415 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.69■□□□□ 0.58
IRX3P78415 AC025048.3-201ENST00000590609 569 ntBASIC18.69■□□□□ 0.58
IRX3P78415 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 AL365330.1-201ENST00000607459 531 ntBASIC18.69■□□□□ 0.58
IRX3P78415 AC005702.4-201ENST00000618393 416 ntBASIC18.69■□□□□ 0.58
IRX3P78415 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 TSPY26P-202ENST00000565928 3884 ntBASIC18.69■□□□□ 0.58
IRX3P78415 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
IRX3P78415 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
IRX3P78415 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
IRX3P78415 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.69■□□□□ 0.58
IRX3P78415 AC005622.1-201ENST00000636801 1703 ntBASIC18.69■□□□□ 0.58
IRX3P78415 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
IRX3P78415 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 TMEM14DP-201ENST00000422205 345 ntBASIC18.68■□□□□ 0.58
IRX3P78415 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.68■□□□□ 0.58
IRX3P78415 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 AC104596.2-201ENST00000512793 793 ntBASIC18.68■□□□□ 0.58
IRX3P78415 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 AL512343.1-201ENST00000605837 169 ntBASIC18.68■□□□□ 0.58
IRX3P78415 WFDC1-204ENST00000613603 549 ntBASIC18.68■□□□□ 0.58
IRX3P78415 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
IRX3P78415 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IRX3P78415 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IRX3P78415 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IRX3P78415 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX3P78415 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX3P78415 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
IRX3P78415 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX3P78415 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.67■□□□□ 0.58
IRX3P78415 FO393414.2-201ENST00000405153 598 ntBASIC18.67■□□□□ 0.58
IRX3P78415 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.67■□□□□ 0.58
IRX3P78415 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX3P78415 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IRX3P78415 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IRX3P78415 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IRX3P78415 CYP4F24P-201ENST00000586049 1580 ntBASIC18.67■□□□□ 0.58
IRX3P78415 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IRX3P78415 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.67■□□□□ 0.58
IRX3P78415 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IRX3P78415 U82695.1-201ENST00000635752 1889 ntBASIC18.67■□□□□ 0.58
IRX3P78415 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 AL136982.4-201ENST00000437689 1740 ntBASIC18.66■□□□□ 0.58
IRX3P78415 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 CLK3P2-201ENST00000427566 1453 ntBASIC18.66■□□□□ 0.58
IRX3P78415 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX3P78415 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX3P78415 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms