Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 AP3S2-216ENST00000617003 1561 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 AL691432.1-201ENST00000596308 1422 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.92■□□□□ 0.46
ASIC1P78348 RPSAP43-201ENST00000402237 625 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 AC112482.1-201ENST00000492080 688 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.92■□□□□ 0.46
ASIC1P78348 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.92■□□□□ 0.46
ASIC1P78348 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
ASIC1P78348 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
ASIC1P78348 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
ASIC1P78348 AC084121.4-201ENST00000641598 221 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 AF228730.8-201ENST00000642140 221 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ASIC1P78348 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 FLJ16779-201ENST00000612722 7638 ntBASIC17.92■□□□□ 0.46
ASIC1P78348 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ASIC1P78348 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.92■□□□□ 0.46
ASIC1P78348 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ASIC1P78348 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ASIC1P78348 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ASIC1P78348 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ASIC1P78348 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 AC004461.1-201ENST00000412461 403 ntBASIC17.91■□□□□ 0.46
ASIC1P78348 UPF3AP3-201ENST00000420996 769 ntBASIC17.91■□□□□ 0.46
ASIC1P78348 KRT18P32-201ENST00000424695 1287 ntBASIC17.91■□□□□ 0.46
ASIC1P78348 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.91■□□□□ 0.46
ASIC1P78348 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.91■□□□□ 0.46
ASIC1P78348 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ASIC1P78348 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.91■□□□□ 0.46
ASIC1P78348 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
ASIC1P78348 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ASIC1P78348 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.9■□□□□ 0.46
ASIC1P78348 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
ASIC1P78348 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 AL136982.4-201ENST00000437689 1740 ntBASIC17.9■□□□□ 0.46
ASIC1P78348 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.9■□□□□ 0.46
ASIC1P78348 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ASIC1P78348 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.9■□□□□ 0.46
ASIC1P78348 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
ASIC1P78348 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.9■□□□□ 0.46
ASIC1P78348 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.9■□□□□ 0.46
ASIC1P78348 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.9■□□□□ 0.46
ASIC1P78348 AC092865.5-201ENST00000545435 363 ntBASIC17.9■□□□□ 0.46
ASIC1P78348 RARRES2P9-201ENST00000565168 469 ntBASIC17.9■□□□□ 0.46
ASIC1P78348 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.9■□□□□ 0.46
ASIC1P78348 AC055717.3-201ENST00000622967 595 ntBASIC17.9■□□□□ 0.46
ASIC1P78348 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 BNIP3P1-202ENST00000550043 1585 ntBASIC17.9■□□□□ 0.46
ASIC1P78348 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.9■□□□□ 0.46
ASIC1P78348 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ASIC1P78348 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ASIC1P78348 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms