Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
AP1S1P61966 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S1P61966 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.11■□□□□ 0.17
AP1S1P61966 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S1P61966 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 AC022144.1-201ENST00000602255 1580 ntBASIC16.11■□□□□ 0.17
AP1S1P61966 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S1P61966 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.1■□□□□ 0.17
AP1S1P61966 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.1■□□□□ 0.17
AP1S1P61966 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.1■□□□□ 0.17
AP1S1P61966 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.1■□□□□ 0.17
AP1S1P61966 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 AC025048.3-201ENST00000590609 569 ntBASIC16.1■□□□□ 0.17
AP1S1P61966 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 AC005702.4-201ENST00000618393 416 ntBASIC16.1■□□□□ 0.17
AP1S1P61966 AJ011932.1-201ENST00000621707 465 ntBASIC16.1■□□□□ 0.17
AP1S1P61966 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.1■□□□□ 0.17
AP1S1P61966 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S1P61966 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
AP1S1P61966 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S1P61966 BTBD7P1-201ENST00000447253 1453 ntBASIC16.1■□□□□ 0.17
AP1S1P61966 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
AP1S1P61966 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
AP1S1P61966 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
AP1S1P61966 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.09■□□□□ 0.17
AP1S1P61966 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
AP1S1P61966 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.09■□□□□ 0.17
AP1S1P61966 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
AP1S1P61966 AC136604.1-201ENST00000418535 575 ntBASIC16.09■□□□□ 0.17
AP1S1P61966 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.09■□□□□ 0.17
AP1S1P61966 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.09■□□□□ 0.17
AP1S1P61966 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.09■□□□□ 0.17
AP1S1P61966 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.09■□□□□ 0.17
AP1S1P61966 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
AP1S1P61966 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.09■□□□□ 0.17
AP1S1P61966 HNRNPUP1-201ENST00000554987 333 ntBASIC16.09■□□□□ 0.17
AP1S1P61966 SPCS2P1-201ENST00000561636 679 ntBASIC16.09■□□□□ 0.17
AP1S1P61966 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
AP1S1P61966 AL096865.1-201ENST00000606796 927 ntBASIC16.09■□□□□ 0.17
AP1S1P61966 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S1P61966 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms