Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ZC3H6P61129 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.17■□□□□ 0.98
ZC3H6P61129 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H6P61129 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZC3H6P61129 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.16■□□□□ 0.98
ZC3H6P61129 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.16■□□□□ 0.98
ZC3H6P61129 BTBD6P1-201ENST00000412176 1267 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 KRT18P43-201ENST00000469825 1281 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.16■□□□□ 0.98
ZC3H6P61129 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 RN7SL190P-201ENST00000582519 257 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H6P61129 AC106872.11-201ENST00000605838 421 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 AC005695.3-201ENST00000614522 232 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ZC3H6P61129 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H6P61129 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H6P61129 AP001094.4-201ENST00000579008 2176 ntBASIC21.16■□□□□ 0.98
ZC3H6P61129 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ZC3H6P61129 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 AC145423.3-201ENST00000615987 467 ntBASIC21.15■□□□□ 0.98
ZC3H6P61129 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ZC3H6P61129 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H6P61129 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H6P61129 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H6P61129 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.14■□□□□ 0.98
ZC3H6P61129 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
ZC3H6P61129 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ZC3H6P61129 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZC3H6P61129 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC21.14■□□□□ 0.97
ZC3H6P61129 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ZC3H6P61129 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC21.14■□□□□ 0.97
ZC3H6P61129 AKR7A2P1-201ENST00000460134 915 ntBASIC21.14■□□□□ 0.97
ZC3H6P61129 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 AC093813.1-201ENST00000605066 256 ntBASIC21.14■□□□□ 0.97
ZC3H6P61129 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H6P61129 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
ZC3H6P61129 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ZC3H6P61129 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.14■□□□□ 0.97
ZC3H6P61129 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms