Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 AL132655.2-201ENST00000596276 594 ntBASIC15.84■□□□□ 0.13
SRP54P61011 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 AL035252.4-201ENST00000624174 288 ntBASIC15.84■□□□□ 0.13
SRP54P61011 AC025048.6-201ENST00000634326 1161 ntBASIC15.84■□□□□ 0.13
SRP54P61011 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.84■□□□□ 0.13
SRP54P61011 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 REXO1L8P-201ENST00000604378 1897 ntBASIC15.84■□□□□ 0.13
SRP54P61011 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SRP54P61011 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.84■□□□□ 0.13
SRP54P61011 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SRP54P61011 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.83■□□□□ 0.13
SRP54P61011 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
SRP54P61011 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.83■□□□□ 0.13
SRP54P61011 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.83■□□□□ 0.13
SRP54P61011 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SRP54P61011 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SRP54P61011 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 AC245100.5-201ENST00000452108 331 ntBASIC15.83■□□□□ 0.12
SRP54P61011 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 DOC2GP-202ENST00000514950 1163 ntBASIC15.83■□□□□ 0.12
SRP54P61011 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 AL358472.5-202ENST00000641448 1267 ntBASIC15.83■□□□□ 0.12
SRP54P61011 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 ME2P1-201ENST00000426028 1970 ntBASIC15.83■□□□□ 0.12
SRP54P61011 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.83■□□□□ 0.12
SRP54P61011 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRP54P61011 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SRP54P61011 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 SPDYE19P-201ENST00000338590 713 ntBASIC15.82■□□□□ 0.12
SRP54P61011 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 FO393414.2-201ENST00000405153 598 ntBASIC15.82■□□□□ 0.12
SRP54P61011 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 AL353779.1-201ENST00000434793 351 ntBASIC15.82■□□□□ 0.12
SRP54P61011 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.82■□□□□ 0.12
SRP54P61011 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.82■□□□□ 0.12
SRP54P61011 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.82■□□□□ 0.12
SRP54P61011 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.82■□□□□ 0.12
SRP54P61011 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.82■□□□□ 0.12
SRP54P61011 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP54P61011 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SRP54P61011 AL109936.8-201ENST00000641772 604 ntBASIC15.82■□□□□ 0.12
SRP54P61011 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 AC063926.2-201ENST00000623766 1308 ntBASIC15.82■□□□□ 0.12
SRP54P61011 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP54P61011 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 AL691432.1-201ENST00000596308 1422 ntBASIC15.82■□□□□ 0.12
SRP54P61011 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SRP54P61011 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms