Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.84□□□□□ -0.19
AP3S2P59780 SLC25A3P1-201ENST00000443844 931 ntBASIC13.84□□□□□ -0.19
AP3S2P59780 HOMER2P1-201ENST00000455653 964 ntBASIC13.84□□□□□ -0.19
AP3S2P59780 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.84□□□□□ -0.19
AP3S2P59780 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 AC010331.1-201ENST00000611423 582 ntBASIC13.84□□□□□ -0.19
AP3S2P59780 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 AC007686.3-201ENST00000619017 3487 ntBASIC13.84□□□□□ -0.19
AP3S2P59780 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 TP73-AS1-210ENST00000637775 1455 ntBASIC13.84□□□□□ -0.19
AP3S2P59780 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP3S2P59780 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.84□□□□□ -0.19
AP3S2P59780 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP3S2P59780 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.83□□□□□ -0.19
AP3S2P59780 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.83□□□□□ -0.19
AP3S2P59780 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
AP3S2P59780 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.83□□□□□ -0.19
AP3S2P59780 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
AP3S2P59780 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S2P59780 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S2P59780 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP3S2P59780 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
AP3S2P59780 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
AP3S2P59780 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 AC008550.1-201ENST00000511500 884 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 AC087641.1-201ENST00000557561 1021 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
AP3S2P59780 AC126365.1-201ENST00000578585 1514 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.83□□□□□ -0.2
AP3S2P59780 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 AC091951.1-201ENST00000512854 2465 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 FGD5P1-202ENST00000614866 2498 ntBASIC13.83□□□□□ -0.2
AP3S2P59780 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.83□□□□□ -0.2
AP3S2P59780 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP3S2P59780 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.82□□□□□ -0.2
AP3S2P59780 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 AL353732.1-201ENST00000569618 1459 ntBASIC13.82□□□□□ -0.2
AP3S2P59780 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP3S2P59780 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms