Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4BP1P59074 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 GAPDHP21-201ENST00000450301 1010 ntBASIC18.37■□□□□ 0.53
CHMP4BP1P59074 RN7SL692P-201ENST00000464677 288 ntBASIC18.37■□□□□ 0.53
CHMP4BP1P59074 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 RN7SL828P-201ENST00000607615 303 ntBASIC18.37■□□□□ 0.53
CHMP4BP1P59074 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP4BP1P59074 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 RPL37AP1-201ENST00000412502 279 ntBASIC18.36■□□□□ 0.53
CHMP4BP1P59074 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.36■□□□□ 0.53
CHMP4BP1P59074 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 AC025048.6-201ENST00000634326 1161 ntBASIC18.36■□□□□ 0.53
CHMP4BP1P59074 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP4BP1P59074 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms