Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TARDBPP1-201ENST00000442013 1203 ntBASIC20.92■□□□□ 0.94
RIPK4P57078 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.92■□□□□ 0.94
RIPK4P57078 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RIPK4P57078 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.92■□□□□ 0.94
RIPK4P57078 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RIPK4P57078 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.92■□□□□ 0.94
RIPK4P57078 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.92■□□□□ 0.94
RIPK4P57078 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.92■□□□□ 0.94
RIPK4P57078 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.92■□□□□ 0.94
RIPK4P57078 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.92■□□□□ 0.94
RIPK4P57078 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.92■□□□□ 0.94
RIPK4P57078 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.92■□□□□ 0.94
RIPK4P57078 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK4P57078 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK4P57078 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.91■□□□□ 0.94
RIPK4P57078 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 AC074338.1-201ENST00000416825 156 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RIPK4P57078 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.91■□□□□ 0.94
RIPK4P57078 SPTLC1P1-201ENST00000447199 261 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 HNRNPUP1-201ENST00000554987 333 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.91■□□□□ 0.94
RIPK4P57078 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.91■□□□□ 0.94
RIPK4P57078 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK4P57078 AC138761.1-201ENST00000584393 385 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 AC097359.3-201ENST00000603982 1210 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 LINC02084-201ENST00000606069 1096 ntBASIC20.91■□□□□ 0.94
RIPK4P57078 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.91■□□□□ 0.94
RIPK4P57078 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RIPK4P57078 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK4P57078 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RIPK4P57078 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 GNAQP1-201ENST00000444815 1067 ntBASIC20.9■□□□□ 0.94
RIPK4P57078 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.9■□□□□ 0.94
RIPK4P57078 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 AC104794.3-201ENST00000566840 1248 ntBASIC20.9■□□□□ 0.94
RIPK4P57078 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.9■□□□□ 0.94
RIPK4P57078 AC009118.2-201ENST00000613275 655 ntBASIC20.9■□□□□ 0.94
RIPK4P57078 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.9■□□□□ 0.94
RIPK4P57078 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK4P57078 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK4P57078 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RIPK4P57078 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.89■□□□□ 0.94
RIPK4P57078 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
RIPK4P57078 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RIPK4P57078 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RIPK4P57078 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
RIPK4P57078 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.89■□□□□ 0.94
RIPK4P57078 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK4P57078 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RIPK4P57078 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RIPK4P57078 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RIPK4P57078 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.89■□□□□ 0.93
RIPK4P57078 AL589987.1-201ENST00000453380 819 ntBASIC20.89■□□□□ 0.93
RIPK4P57078 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.89■□□□□ 0.93
RIPK4P57078 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.89■□□□□ 0.93
RIPK4P57078 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 LINC01115-203ENST00000606068 577 ntBASIC20.89■□□□□ 0.93
RIPK4P57078 AC074044.1-201ENST00000609673 707 ntBASIC20.89■□□□□ 0.93
RIPK4P57078 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
RIPK4P57078 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 AP003680.1-201ENST00000598970 3660 ntBASIC20.89■□□□□ 0.93
RIPK4P57078 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 820.4 ms