Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN8P56748 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN8P56748 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.26■□□□□ 0.03
CLDN8P56748 RNA5SP416-201ENST00000516838 111 ntBASIC15.26■□□□□ 0.03
CLDN8P56748 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 AC027307.2-201ENST00000591252 911 ntBASIC15.26■□□□□ 0.03
CLDN8P56748 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN8P56748 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.26■□□□□ 0.03
CLDN8P56748 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN8P56748 AC008267.7-201ENST00000624570 1194 ntBASIC15.26■□□□□ 0.03
CLDN8P56748 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CLDN8P56748 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 MST1L-201ENST00000442552 2185 ntBASIC15.26■□□□□ 0.03
CLDN8P56748 AC138035.3-201ENST00000622706 2791 ntBASIC15.26■□□□□ 0.03
CLDN8P56748 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN8P56748 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN8P56748 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN8P56748 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 ZNF259P1-201ENST00000407656 1365 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 TNRC18P2-201ENST00000417666 2714 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN8P56748 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN8P56748 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CLDN8P56748 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN8P56748 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN8P56748 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 AC004987.2-201ENST00000395959 1148 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CLDN8P56748 AL591424.1-201ENST00000442569 1213 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN8P56748 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN8P56748 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN8P56748 MIR4313-201ENST00000580760 101 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 REXO1L1P-202ENST00000608646 1974 ntBASIC15.25■□□□□ 0.03
CLDN8P56748 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN8P56748 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN8P56748 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN8P56748 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN8P56748 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms