Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 AL139400.1-201ENST00000366220 510 ntBASIC16.2■□□□□ 0.18
WNT3AP56704 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
WNT3AP56704 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 AC109322.1-201ENST00000524499 1264 ntBASIC16.2■□□□□ 0.18
WNT3AP56704 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 AL512356.2-201ENST00000546955 174 ntBASIC16.2■□□□□ 0.18
WNT3AP56704 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.2■□□□□ 0.18
WNT3AP56704 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
WNT3AP56704 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 AC046158.3-201ENST00000624947 2558 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.19■□□□□ 0.18
WNT3AP56704 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
WNT3AP56704 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
WNT3AP56704 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
WNT3AP56704 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.19■□□□□ 0.18
WNT3AP56704 SPDYE7P-202ENST00000420373 878 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.19■□□□□ 0.18
WNT3AP56704 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.19■□□□□ 0.18
WNT3AP56704 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 HLA-J-203ENST00000494367 1087 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
WNT3AP56704 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.19■□□□□ 0.18
WNT3AP56704 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.19■□□□□ 0.18
WNT3AP56704 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.19■□□□□ 0.18
WNT3AP56704 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 AP001160.2-201ENST00000596071 487 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 AC139530.3-201ENST00000620344 690 ntBASIC16.19■□□□□ 0.18
WNT3AP56704 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
WNT3AP56704 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
WNT3AP56704 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
WNT3AP56704 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
WNT3AP56704 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
WNT3AP56704 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.18■□□□□ 0.18
WNT3AP56704 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 TSEN15P1-201ENST00000423257 515 ntBASIC16.18■□□□□ 0.18
WNT3AP56704 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.18■□□□□ 0.18
WNT3AP56704 EEF1DP4-201ENST00000446006 880 ntBASIC16.18■□□□□ 0.18
WNT3AP56704 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.18■□□□□ 0.18
WNT3AP56704 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.18■□□□□ 0.18
WNT3AP56704 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 RN7SL828P-201ENST00000607615 303 ntBASIC16.18■□□□□ 0.18
WNT3AP56704 AL133215.2-201ENST00000609242 977 ntBASIC16.18■□□□□ 0.18
WNT3AP56704 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms