Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 RPL37AP1-201ENST00000412502 279 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 HIST3H2BA-201ENST00000436555 524 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.49□□□□□ -0.09
SUMO3P55854 HNRNPUP1-201ENST00000554987 333 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.49□□□□□ -0.09
SUMO3P55854 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.49□□□□□ -0.09
SUMO3P55854 TEX28P1-201ENST00000613479 1221 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 AL138828.2-201ENST00000615812 383 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 TEX28P2-201ENST00000617764 1221 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 AL033527.5-202ENST00000641632 1098 ntBASIC14.49□□□□□ -0.09
SUMO3P55854 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.49□□□□□ -0.09
SUMO3P55854 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
SUMO3P55854 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SUMO3P55854 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SUMO3P55854 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.49□□□□□ -0.09
SUMO3P55854 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.48□□□□□ -0.09
SUMO3P55854 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 AC018695.7-201ENST00000624587 2492 ntBASIC14.48□□□□□ -0.09
SUMO3P55854 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.48□□□□□ -0.09
SUMO3P55854 RN7SL618P-201ENST00000477850 296 ntBASIC14.48□□□□□ -0.09
SUMO3P55854 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.48□□□□□ -0.09
SUMO3P55854 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.48□□□□□ -0.09
SUMO3P55854 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.48□□□□□ -0.09
SUMO3P55854 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.48□□□□□ -0.09
SUMO3P55854 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SUMO3P55854 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.48□□□□□ -0.09
SUMO3P55854 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.48□□□□□ -0.09
SUMO3P55854 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.48□□□□□ -0.09
SUMO3P55854 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SUMO3P55854 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SUMO3P55854 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.47□□□□□ -0.09
SUMO3P55854 PMS2P2-201ENST00000425039 1128 ntBASIC14.47□□□□□ -0.09
SUMO3P55854 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.47□□□□□ -0.09
SUMO3P55854 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.47□□□□□ -0.09
SUMO3P55854 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.47□□□□□ -0.09
SUMO3P55854 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SUMO3P55854 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SUMO3P55854 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SUMO3P55854 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SUMO3P55854 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms