Protein–RNA interactions for Protein: P54849

EMP1, Epithelial membrane protein 1, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1P54849 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.08□□□□□ -0.48
EMP1P54849 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.08□□□□□ -0.48
EMP1P54849 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
EMP1P54849 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
EMP1P54849 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.08□□□□□ -0.48
EMP1P54849 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
EMP1P54849 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
EMP1P54849 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EMP1P54849 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.08□□□□□ -0.48
EMP1P54849 AC092919.2-201ENST00000623631 1645 ntBASIC12.08□□□□□ -0.48
EMP1P54849 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
EMP1P54849 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
EMP1P54849 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
EMP1P54849 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 YBX2P1-201ENST00000394192 760 ntBASIC12.07□□□□□ -0.48
EMP1P54849 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.07□□□□□ -0.48
EMP1P54849 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 FAM58CP-201ENST00000435741 640 ntBASIC12.07□□□□□ -0.48
EMP1P54849 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.07□□□□□ -0.48
EMP1P54849 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 DUX4L17-201ENST00000557360 1267 ntBASIC12.07□□□□□ -0.48
EMP1P54849 CYP2A7P1-201ENST00000595391 815 ntBASIC12.07□□□□□ -0.48
EMP1P54849 AC068137.2-201ENST00000605408 478 ntBASIC12.07□□□□□ -0.48
EMP1P54849 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.07□□□□□ -0.48
EMP1P54849 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 AL645728.1-201ENST00000366221 2101 ntBASIC12.07□□□□□ -0.48
EMP1P54849 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
EMP1P54849 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.07□□□□□ -0.48
EMP1P54849 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EMP1P54849 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.06□□□□□ -0.48
EMP1P54849 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 MYO15B-237ENST00000642007 4893 ntBASIC12.06□□□□□ -0.48
EMP1P54849 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.06□□□□□ -0.48
EMP1P54849 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
EMP1P54849 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.06□□□□□ -0.48
EMP1P54849 HMGA1P7-201ENST00000406908 502 ntBASIC12.06□□□□□ -0.48
EMP1P54849 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
EMP1P54849 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms