Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 AP3S2-216ENST00000617003 1561 ntBASIC17.65■□□□□ 0.42
PMS1P54277 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PMS1P54277 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PMS1P54277 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PMS1P54277 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMS1P54277 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PMS1P54277 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PMS1P54277 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PMS1P54277 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PMS1P54277 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 MKNK2P1-201ENST00000437526 628 ntBASIC17.64■□□□□ 0.41
PMS1P54277 AL592309.1-201ENST00000443127 649 ntBASIC17.64■□□□□ 0.41
PMS1P54277 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.64■□□□□ 0.41
PMS1P54277 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.64■□□□□ 0.41
PMS1P54277 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 MTDHP5-201ENST00000598980 586 ntBASIC17.64■□□□□ 0.41
PMS1P54277 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.64■□□□□ 0.41
PMS1P54277 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
PMS1P54277 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PMS1P54277 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.64■□□□□ 0.41
PMS1P54277 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
PMS1P54277 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.63■□□□□ 0.41
PMS1P54277 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 UXT-AS1-201ENST00000590504 1525 ntBASIC17.63■□□□□ 0.41
PMS1P54277 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 ELL2P1-201ENST00000413990 1906 ntBASIC17.63■□□□□ 0.41
PMS1P54277 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.63■□□□□ 0.41
PMS1P54277 AC023824.1-201ENST00000562945 2975 ntBASIC17.63■□□□□ 0.41
PMS1P54277 CYP4F24P-201ENST00000586049 1580 ntBASIC17.63■□□□□ 0.41
PMS1P54277 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PMS1P54277 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.63■□□□□ 0.41
PMS1P54277 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.63■□□□□ 0.41
PMS1P54277 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.63■□□□□ 0.41
PMS1P54277 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 ACTG1P14-201ENST00000446382 1122 ntBASIC17.63■□□□□ 0.41
PMS1P54277 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.63■□□□□ 0.41
PMS1P54277 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.63■□□□□ 0.41
PMS1P54277 IGHV3-62-201ENST00000520057 340 ntBASIC17.63■□□□□ 0.41
PMS1P54277 KRT8P23-201ENST00000560090 1207 ntBASIC17.63■□□□□ 0.41
PMS1P54277 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.63■□□□□ 0.41
PMS1P54277 AC022145.2-201ENST00000598203 171 ntBASIC17.63■□□□□ 0.41
PMS1P54277 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 AC105339.1-204ENST00000636249 355 ntBASIC17.63■□□□□ 0.41
PMS1P54277 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.63■□□□□ 0.41
PMS1P54277 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.63■□□□□ 0.41
PMS1P54277 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PMS1P54277 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms