Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.59■□□□□ 0.73
NUP98P52948 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.59■□□□□ 0.73
NUP98P52948 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.58■□□□□ 0.73
NUP98P52948 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.58■□□□□ 0.73
NUP98P52948 AL662844.4-201ENST00000606367 2838 ntBASIC19.58■□□□□ 0.73
NUP98P52948 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.58■□□□□ 0.73
NUP98P52948 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 MTX1P1-201ENST00000440904 838 ntBASIC19.58■□□□□ 0.73
NUP98P52948 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NUP98P52948 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.58■□□□□ 0.73
NUP98P52948 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.58■□□□□ 0.73
NUP98P52948 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
NUP98P52948 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP98P52948 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NUP98P52948 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.58■□□□□ 0.72
NUP98P52948 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 NKILA-202ENST00000614771 2598 ntBASIC19.58■□□□□ 0.72
NUP98P52948 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 MIR326-201ENST00000362220 95 ntBASIC19.58■□□□□ 0.72
NUP98P52948 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NUP98P52948 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NUP98P52948 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.58■□□□□ 0.72
NUP98P52948 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.58■□□□□ 0.72
NUP98P52948 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.58■□□□□ 0.72
NUP98P52948 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP98P52948 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.58■□□□□ 0.72
NUP98P52948 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.58■□□□□ 0.72
NUP98P52948 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.58■□□□□ 0.72
NUP98P52948 AC005695.3-201ENST00000614522 232 ntBASIC19.58■□□□□ 0.72
NUP98P52948 AC138951.2-201ENST00000623455 1161 ntBASIC19.58■□□□□ 0.72
NUP98P52948 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.58■□□□□ 0.72
NUP98P52948 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.57■□□□□ 0.72
NUP98P52948 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NUP98P52948 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NUP98P52948 KRT18P25-201ENST00000508931 1278 ntBASIC19.57■□□□□ 0.72
NUP98P52948 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.57■□□□□ 0.72
NUP98P52948 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.57■□□□□ 0.72
NUP98P52948 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.57■□□□□ 0.72
NUP98P52948 AL645728.2-202ENST00000641679 227 ntBASIC19.57■□□□□ 0.72
NUP98P52948 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NUP98P52948 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP98P52948 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NUP98P52948 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP98P52948 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NUP98P52948 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.56■□□□□ 0.72
NUP98P52948 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP98P52948 C2orf27AP3-201ENST00000434123 579 ntBASIC19.56■□□□□ 0.72
NUP98P52948 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.56■□□□□ 0.72
NUP98P52948 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.56■□□□□ 0.72
NUP98P52948 AP003171.2-201ENST00000528208 925 ntBASIC19.56■□□□□ 0.72
NUP98P52948 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.56■□□□□ 0.72
NUP98P52948 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.56■□□□□ 0.72
NUP98P52948 AL354718.3-201ENST00000616414 581 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms