Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
SMSP52788 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.11■□□□□ 0.01
SMSP52788 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 AC055876.3-201ENST00000431496 288 ntBASIC15.11■□□□□ 0.01
SMSP52788 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.11■□□□□ 0.01
SMSP52788 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.11■□□□□ 0.01
SMSP52788 TERF1P3-201ENST00000505638 1227 ntBASIC15.11■□□□□ 0.01
SMSP52788 AC079140.1-201ENST00000508039 487 ntBASIC15.11■□□□□ 0.01
SMSP52788 KRT8P48-201ENST00000515599 1220 ntBASIC15.11■□□□□ 0.01
SMSP52788 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.11■□□□□ 0.01
SMSP52788 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.11■□□□□ 0.01
SMSP52788 RARRES2P8-201ENST00000566335 367 ntBASIC15.11■□□□□ 0.01
SMSP52788 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.11■□□□□ 0.01
SMSP52788 MIR4492-201ENST00000581627 80 ntBASIC15.11■□□□□ 0.01
SMSP52788 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.11■□□□□ 0.01
SMSP52788 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.11■□□□□ 0.01
SMSP52788 AC138649.4-201ENST00000612222 287 ntBASIC15.11■□□□□ 0.01
SMSP52788 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.11■□□□□ 0.01
SMSP52788 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 PCGF3-213ENST00000620529 1899 ntBASIC15.11■□□□□ 0.01
SMSP52788 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 TUBB3P1-201ENST00000405796 1332 ntBASIC15.11■□□□□ 0.01
SMSP52788 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
SMSP52788 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SMSP52788 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMSP52788 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
SMSP52788 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.1■□□□□ 0.01
SMSP52788 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SMSP52788 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SMSP52788 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.1■□□□□ 0.01
SMSP52788 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 MIR943-201ENST00000401286 94 ntBASIC15.1■□□□□ 0.01
SMSP52788 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.1■□□□□ 0.01
SMSP52788 KLF2P3-201ENST00000451977 1087 ntBASIC15.1■□□□□ 0.01
SMSP52788 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 SLC25A6P2-201ENST00000497974 877 ntBASIC15.1■□□□□ 0.01
SMSP52788 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.1■□□□□ 0.01
SMSP52788 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.1■□□□□ 0.01
SMSP52788 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.1■□□□□ 0.01
SMSP52788 AP001059.3-201ENST00000619053 235 ntBASIC15.1■□□□□ 0.01
SMSP52788 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SMSP52788 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 AC063926.2-201ENST00000623766 1308 ntBASIC15.1■□□□□ 0.01
SMSP52788 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.1■□□□□ 0.01
SMSP52788 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMSP52788 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMSP52788 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.09■□□□□ 0.01
SMSP52788 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMSP52788 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMSP52788 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMSP52788 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms