Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.38■□□□□ 0.37
PDE6CP51160 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PDE6CP51160 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.38■□□□□ 0.37
PDE6CP51160 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PDE6CP51160 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6CP51160 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PDE6CP51160 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.37■□□□□ 0.37
PDE6CP51160 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PDE6CP51160 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6CP51160 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDE6CP51160 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6CP51160 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6CP51160 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6CP51160 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDE6CP51160 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6CP51160 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDE6CP51160 AC069262.1-201ENST00000539058 672 ntBASIC17.37■□□□□ 0.37
PDE6CP51160 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.37■□□□□ 0.37
PDE6CP51160 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PDE6CP51160 AC027307.2-201ENST00000591252 911 ntBASIC17.37■□□□□ 0.37
PDE6CP51160 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.37■□□□□ 0.37
PDE6CP51160 AC093512.1-201ENST00000617969 520 ntBASIC17.37■□□□□ 0.37
PDE6CP51160 Z92544.3-201ENST00000624747 417 ntBASIC17.37■□□□□ 0.37
PDE6CP51160 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6CP51160 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6CP51160 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6CP51160 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.36■□□□□ 0.37
PDE6CP51160 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6CP51160 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6CP51160 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6CP51160 AC105233.2-201ENST00000523697 349 ntBASIC17.36■□□□□ 0.37
PDE6CP51160 AF228730.5-201ENST00000530288 346 ntBASIC17.36■□□□□ 0.37
PDE6CP51160 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6CP51160 MIR4321-201ENST00000592276 80 ntBASIC17.36■□□□□ 0.37
PDE6CP51160 AC073389.1-201ENST00000595595 795 ntBASIC17.36■□□□□ 0.37
PDE6CP51160 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6CP51160 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6CP51160 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6CP51160 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 AC008677.1-201ENST00000519230 1561 ntBASIC17.36■□□□□ 0.37
PDE6CP51160 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6CP51160 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6CP51160 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
PDE6CP51160 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms