Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.32□□□□□ -0.12
SRP9P49458 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.32□□□□□ -0.12
SRP9P49458 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.31□□□□□ -0.12
SRP9P49458 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.31□□□□□ -0.12
SRP9P49458 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.31□□□□□ -0.12
SRP9P49458 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 MIR574-201ENST00000385209 96 ntBASIC14.31□□□□□ -0.12
SRP9P49458 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 IGLL3P-201ENST00000412472 434 ntBASIC14.31□□□□□ -0.12
SRP9P49458 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
SRP9P49458 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 AC087641.1-201ENST00000557561 1021 ntBASIC14.31□□□□□ -0.12
SRP9P49458 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.31□□□□□ -0.12
SRP9P49458 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.31□□□□□ -0.12
SRP9P49458 AC010507.1-201ENST00000633895 436 ntBASIC14.31□□□□□ -0.12
SRP9P49458 AL645728.2-201ENST00000641974 660 ntBASIC14.31□□□□□ -0.12
SRP9P49458 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.31□□□□□ -0.12
SRP9P49458 CICP4-201ENST00000447359 2812 ntBASIC14.31□□□□□ -0.12
SRP9P49458 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SRP9P49458 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SRP9P49458 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SRP9P49458 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.3□□□□□ -0.12
SRP9P49458 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SRP9P49458 AC131009.4-201ENST00000624048 1740 ntBASIC14.3□□□□□ -0.12
SRP9P49458 AL365209.1-201ENST00000624418 6473 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms