Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CENPAP49450 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
CENPAP49450 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CENPAP49450 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CENPAP49450 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CENPAP49450 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CENPAP49450 RNA5SP415-201ENST00000517246 115 ntBASIC14.64□□□□□ -0.07
CENPAP49450 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.64□□□□□ -0.07
CENPAP49450 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CENPAP49450 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
CENPAP49450 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 AC023824.1-201ENST00000562945 2975 ntBASIC14.64□□□□□ -0.07
CENPAP49450 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CENPAP49450 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CENPAP49450 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.64□□□□□ -0.07
CENPAP49450 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 RNU1-129P-201ENST00000384064 167 ntBASIC14.63□□□□□ -0.07
CENPAP49450 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 MRPL3P1-201ENST00000400109 1033 ntBASIC14.63□□□□□ -0.07
CENPAP49450 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 KRT126P-201ENST00000549467 1181 ntBASIC14.63□□□□□ -0.07
CENPAP49450 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 U1.21-201ENST00000580816 167 ntBASIC14.63□□□□□ -0.07
CENPAP49450 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.63□□□□□ -0.07
CENPAP49450 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.63□□□□□ -0.07
CENPAP49450 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CENPAP49450 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.63□□□□□ -0.07
CENPAP49450 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms