Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 CNN2P11-201ENST00000429351 262 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 AP006288.1-201ENST00000446065 395 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 AC023141.5-201ENST00000458585 616 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ALG1L8P-201ENST00000533887 760 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 AC243562.2-201ENST00000561247 970 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 AC026979.3-201ENST00000607315 403 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 MST1L-201ENST00000442552 2185 ntBASIC14.31□□□□□ -0.12
CSNK1A1P48729 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CSNK1A1P48729 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSNK1A1P48729 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 FAM58DP-201ENST00000428076 619 ntBASIC14.3□□□□□ -0.12
CSNK1A1P48729 RBPMS2P1-201ENST00000437762 623 ntBASIC14.3□□□□□ -0.12
CSNK1A1P48729 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSNK1A1P48729 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 AC093520.2-201ENST00000561830 333 ntBASIC14.3□□□□□ -0.12
CSNK1A1P48729 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.3□□□□□ -0.12
CSNK1A1P48729 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms