Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 AC136604.1-201ENST00000418535 575 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 SPDYE7P-202ENST00000420373 878 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 HIST3H2BA-201ENST00000436555 524 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 SNHG9-202ENST00000564014 471 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 AL596442.2-201ENST00000610240 980 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 PPT1-215ENST00000641471 2368 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SLC6A12P48065 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC6A12P48065 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.42■□□□□ 0.06
SLC6A12P48065 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 HLA-J-203ENST00000494367 1087 ntBASIC15.42■□□□□ 0.06
SLC6A12P48065 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC6A12P48065 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.42■□□□□ 0.06
SLC6A12P48065 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 AC090616.6-203ENST00000579186 1945 ntBASIC15.42■□□□□ 0.06
SLC6A12P48065 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.42■□□□□ 0.06
SLC6A12P48065 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
SLC6A12P48065 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.42■□□□□ 0.06
SLC6A12P48065 TMBIM7P-203ENST00000641617 1718 ntBASIC15.42■□□□□ 0.06
SLC6A12P48065 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC6A12P48065 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SLC6A12P48065 AC136621.1-201ENST00000624017 2304 ntBASIC15.42■□□□□ 0.06
SLC6A12P48065 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC6A12P48065 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 KRT8P12-202ENST00000472924 1397 ntBASIC15.41■□□□□ 0.06
SLC6A12P48065 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC6A12P48065 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC6A12P48065 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC6A12P48065 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC6A12P48065 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms