Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 AC026396.1-201ENST00000419388 421 ntBASIC13.2□□□□□ -0.3
NKX2-1P43699 LINC00265-3P-201ENST00000447588 903 ntBASIC13.2□□□□□ -0.3
NKX2-1P43699 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX2-1P43699 TSSC2-201ENST00000450217 709 ntBASIC13.2□□□□□ -0.3
NKX2-1P43699 SLC25A6P2-201ENST00000497974 877 ntBASIC13.2□□□□□ -0.3
NKX2-1P43699 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX2-1P43699 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-1P43699 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-1P43699 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-1P43699 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 AC090616.6-203ENST00000579186 1945 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 AC011477.6-201ENST00000604980 1927 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX2-1P43699 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.19□□□□□ -0.3
NKX2-1P43699 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX2-1P43699 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 MIR5100-201ENST00000579544 119 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 AC092329.2-201ENST00000598402 547 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 AP000550.4-202ENST00000639755 178 ntBASIC13.19□□□□□ -0.3
NKX2-1P43699 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-1P43699 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-1P43699 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX2-1P43699 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-1P43699 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 420.4 ms