Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HTTP42858 AC013355.1-201ENST00000562625 723 ntBASIC17.62■□□□□ 0.41
HTTP42858 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.62■□□□□ 0.41
HTTP42858 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
HTTP42858 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.62■□□□□ 0.41
HTTP42858 AC004899.1-201ENST00000424687 1714 ntBASIC17.62■□□□□ 0.41
HTTP42858 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
HTTP42858 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.62■□□□□ 0.41
HTTP42858 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.62■□□□□ 0.41
HTTP42858 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HTTP42858 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTTP42858 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.62■□□□□ 0.41
HTTP42858 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 AC079178.1-201ENST00000420915 656 ntBASIC17.61■□□□□ 0.41
HTTP42858 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 PPY2P-201ENST00000582808 702 ntBASIC17.61■□□□□ 0.41
HTTP42858 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 MIR1227-201ENST00000408484 88 ntBASIC17.61■□□□□ 0.41
HTTP42858 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HTTP42858 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTTP42858 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.61■□□□□ 0.41
HTTP42858 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.6■□□□□ 0.41
HTTP42858 AC103988.2-201ENST00000561804 725 ntBASIC17.6■□□□□ 0.41
HTTP42858 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.6■□□□□ 0.41
HTTP42858 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HTTP42858 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 RNU1-114P-201ENST00000365297 166 ntBASIC17.6■□□□□ 0.41
HTTP42858 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 RN7SL8P-201ENST00000461771 266 ntBASIC17.6■□□□□ 0.41
HTTP42858 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.6■□□□□ 0.41
HTTP42858 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HTTP42858 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.6■□□□□ 0.41
HTTP42858 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HTTP42858 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HTTP42858 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.59■□□□□ 0.41
HTTP42858 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 RPSAP31-201ENST00000416648 895 ntBASIC17.59■□□□□ 0.41
HTTP42858 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 HIST2H2BB-201ENST00000449108 381 ntBASIC17.59■□□□□ 0.41
HTTP42858 RN7SL818P-201ENST00000485099 259 ntBASIC17.59■□□□□ 0.41
HTTP42858 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.59■□□□□ 0.41
HTTP42858 RN7SL725P-201ENST00000606439 259 ntBASIC17.59■□□□□ 0.41
HTTP42858 AC100757.4-201ENST00000626934 759 ntBASIC17.59■□□□□ 0.41
HTTP42858 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.59■□□□□ 0.41
HTTP42858 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.59■□□□□ 0.41
HTTP42858 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HTTP42858 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms