Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.16■□□□□ 0.18
MDH1P40925 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.16■□□□□ 0.18
MDH1P40925 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.16■□□□□ 0.18
MDH1P40925 LIN28AP1-201ENST00000429574 405 ntBASIC16.16■□□□□ 0.18
MDH1P40925 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.16■□□□□ 0.18
MDH1P40925 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
MDH1P40925 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
MDH1P40925 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.16■□□□□ 0.18
MDH1P40925 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.16■□□□□ 0.18
MDH1P40925 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.16■□□□□ 0.18
MDH1P40925 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 MYO15B-237ENST00000642007 4893 ntBASIC16.16■□□□□ 0.18
MDH1P40925 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.16■□□□□ 0.18
MDH1P40925 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MDH1P40925 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MDH1P40925 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MDH1P40925 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 ZBED1P1-201ENST00000502364 1930 ntBASIC16.15■□□□□ 0.18
MDH1P40925 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 C8orf49-201ENST00000525043 1968 ntBASIC16.15■□□□□ 0.18
MDH1P40925 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
MDH1P40925 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MDH1P40925 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.15■□□□□ 0.18
MDH1P40925 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.15■□□□□ 0.18
MDH1P40925 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 ATP5G1P1-201ENST00000448724 379 ntBASIC16.15■□□□□ 0.18
MDH1P40925 HOMER2P1-201ENST00000455653 964 ntBASIC16.15■□□□□ 0.18
MDH1P40925 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MDH1P40925 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.15■□□□□ 0.18
MDH1P40925 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.15■□□□□ 0.18
MDH1P40925 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MDH1P40925 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MDH1P40925 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 AC023024.2-201ENST00000623561 1993 ntBASIC16.15■□□□□ 0.18
MDH1P40925 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MDH1P40925 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
MDH1P40925 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.14■□□□□ 0.18
MDH1P40925 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MDH1P40925 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
MDH1P40925 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.14■□□□□ 0.17
MDH1P40925 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.14■□□□□ 0.17
MDH1P40925 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
MDH1P40925 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.14■□□□□ 0.17
MDH1P40925 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.14■□□□□ 0.17
MDH1P40925 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MDH1P40925 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 AC136759.1-202ENST00000530858 2194 ntBASIC16.14■□□□□ 0.17
MDH1P40925 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MDH1P40925 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms