Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 CICP23-201ENST00000605013 2741 ntBASIC14.05□□□□□ -0.16
GDNFP39905 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.05□□□□□ -0.16
GDNFP39905 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.05□□□□□ -0.16
GDNFP39905 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.05□□□□□ -0.16
GDNFP39905 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.05□□□□□ -0.16
GDNFP39905 AC018712.1-201ENST00000455767 687 ntBASIC14.05□□□□□ -0.16
GDNFP39905 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.05□□□□□ -0.16
GDNFP39905 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 AC073648.2-201ENST00000510116 352 ntBASIC14.05□□□□□ -0.16
GDNFP39905 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 OR7E14P-202ENST00000530490 1290 ntBASIC14.05□□□□□ -0.16
GDNFP39905 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.05□□□□□ -0.16
GDNFP39905 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 AC012640.2-201ENST00000561606 901 ntBASIC14.05□□□□□ -0.16
GDNFP39905 MIR4492-201ENST00000581627 80 ntBASIC14.05□□□□□ -0.16
GDNFP39905 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.05□□□□□ -0.16
GDNFP39905 CICP4-201ENST00000447359 2812 ntBASIC14.05□□□□□ -0.16
GDNFP39905 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 AC139749.1-202ENST00000617529 3139 ntBASIC14.05□□□□□ -0.16
GDNFP39905 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.05□□□□□ -0.16
GDNFP39905 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDNFP39905 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
GDNFP39905 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.05□□□□□ -0.16
GDNFP39905 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GDNFP39905 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 PTCHD3P3-201ENST00000403073 906 ntBASIC14.04□□□□□ -0.16
GDNFP39905 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 LAGE3P1-201ENST00000425356 484 ntBASIC14.04□□□□□ -0.16
GDNFP39905 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.04□□□□□ -0.16
GDNFP39905 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.04□□□□□ -0.16
GDNFP39905 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.04□□□□□ -0.16
GDNFP39905 MPDU1-223ENST00000582151 728 ntBASIC14.04□□□□□ -0.16
GDNFP39905 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.04□□□□□ -0.16
GDNFP39905 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.04□□□□□ -0.16
GDNFP39905 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GDNFP39905 MYO15B-237ENST00000642007 4893 ntBASIC14.04□□□□□ -0.16
GDNFP39905 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDNFP39905 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GDNFP39905 AC104581.4-201ENST00000623126 3052 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms