Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GRIK1P39086 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 AL596087.1-201ENST00000400979 1969 ntBASIC16.88■□□□□ 0.29
GRIK1P39086 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.88■□□□□ 0.29
GRIK1P39086 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.88■□□□□ 0.29
GRIK1P39086 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.88■□□□□ 0.29
GRIK1P39086 AC114501.2-201ENST00000439631 535 ntBASIC16.88■□□□□ 0.29
GRIK1P39086 GNAQP1-201ENST00000444815 1067 ntBASIC16.88■□□□□ 0.29
GRIK1P39086 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.88■□□□□ 0.29
GRIK1P39086 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GRIK1P39086 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.88■□□□□ 0.29
GRIK1P39086 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.88■□□□□ 0.29
GRIK1P39086 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GRIK1P39086 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GRIK1P39086 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GRIK1P39086 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.87■□□□□ 0.29
GRIK1P39086 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 AC007541.1-201ENST00000570282 1469 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 AZGP1P1-201ENST00000411909 902 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 AC015922.1-201ENST00000421102 1152 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.87■□□□□ 0.29
GRIK1P39086 SPDYE18-201ENST00000510091 1050 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 DOC2GP-202ENST00000514950 1163 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.87■□□□□ 0.29
GRIK1P39086 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 AL118508.1-201ENST00000613502 2345 ntBASIC16.87■□□□□ 0.29
GRIK1P39086 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.87■□□□□ 0.29
GRIK1P39086 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
GRIK1P39086 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GRIK1P39086 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIK1P39086 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GRIK1P39086 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GRIK1P39086 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GRIK1P39086 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIK1P39086 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.86■□□□□ 0.29
GRIK1P39086 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.86■□□□□ 0.29
GRIK1P39086 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GRIK1P39086 SPDYE19P-201ENST00000338590 713 ntBASIC16.86■□□□□ 0.29
GRIK1P39086 MIR648-201ENST00000385046 94 ntBASIC16.86■□□□□ 0.29
GRIK1P39086 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.86■□□□□ 0.29
GRIK1P39086 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.86■□□□□ 0.29
GRIK1P39086 CRB3P1-201ENST00000449338 276 ntBASIC16.86■□□□□ 0.29
GRIK1P39086 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.86■□□□□ 0.29
GRIK1P39086 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.86■□□□□ 0.29
GRIK1P39086 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.86■□□□□ 0.29
GRIK1P39086 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GRIK1P39086 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
GRIK1P39086 AC025048.3-201ENST00000590609 569 ntBASIC16.86■□□□□ 0.29
GRIK1P39086 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms