Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VAMP1P23763 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VAMP1P23763 AL359258.3-201ENST00000622910 2331 ntBASIC13.63□□□□□ -0.23
VAMP1P23763 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
VAMP1P23763 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.63□□□□□ -0.23
VAMP1P23763 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VAMP1P23763 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.63□□□□□ -0.23
VAMP1P23763 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VAMP1P23763 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.63□□□□□ -0.23
VAMP1P23763 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VAMP1P23763 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VAMP1P23763 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.63□□□□□ -0.23
VAMP1P23763 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.63□□□□□ -0.23
VAMP1P23763 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 AC005089.1-201ENST00000619486 2241 ntBASIC13.62□□□□□ -0.23
VAMP1P23763 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 AC091607.1-201ENST00000490318 1060 ntBASIC13.62□□□□□ -0.23
VAMP1P23763 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.62□□□□□ -0.23
VAMP1P23763 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.62□□□□□ -0.23
VAMP1P23763 AC091167.2-201ENST00000579581 588 ntBASIC13.62□□□□□ -0.23
VAMP1P23763 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.62□□□□□ -0.23
VAMP1P23763 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 TMEM191A-211ENST00000637163 1067 ntBASIC13.62□□□□□ -0.23
VAMP1P23763 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 AL592424.1-201ENST00000563624 1536 ntBASIC13.62□□□□□ -0.23
VAMP1P23763 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VAMP1P23763 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.62□□□□□ -0.23
VAMP1P23763 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 AL023775.1-201ENST00000454907 1746 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 INTS4P1-201ENST00000438455 1935 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.61□□□□□ -0.23
VAMP1P23763 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 AL137013.1-201ENST00000432946 1228 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 AC096582.2-201ENST00000510860 516 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 CYP2A7P1-201ENST00000595391 815 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 AL353135.1-201ENST00000606729 504 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms