Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.21■□□□□ 0.67
NCLP19338 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 CDC14C-201ENST00000428251 1719 ntBASIC19.21■□□□□ 0.67
NCLP19338 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 POU5F1P6-201ENST00000466990 990 ntBASIC19.21■□□□□ 0.67
NCLP19338 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 AC106730.1-201ENST00000566722 1090 ntBASIC19.21■□□□□ 0.67
NCLP19338 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
NCLP19338 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NCLP19338 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.2■□□□□ 0.66
NCLP19338 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.2■□□□□ 0.66
NCLP19338 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.2■□□□□ 0.66
NCLP19338 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NCLP19338 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 PMS2P1-201ENST00000431037 1228 ntBASIC19.2■□□□□ 0.66
NCLP19338 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.2■□□□□ 0.66
NCLP19338 RPL13AP23-201ENST00000480739 586 ntBASIC19.2■□□□□ 0.66
NCLP19338 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.2■□□□□ 0.66
NCLP19338 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.2■□□□□ 0.66
NCLP19338 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.2■□□□□ 0.66
NCLP19338 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.2■□□□□ 0.66
NCLP19338 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.2■□□□□ 0.66
NCLP19338 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.2■□□□□ 0.66
NCLP19338 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.2■□□□□ 0.66
NCLP19338 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NCLP19338 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCLP19338 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.19■□□□□ 0.66
NCLP19338 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NCLP19338 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.19■□□□□ 0.66
NCLP19338 GPAA1P2-202ENST00000606848 1787 ntBASIC19.19■□□□□ 0.66
NCLP19338 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 AC112504.1-201ENST00000623415 1841 ntBASIC19.19■□□□□ 0.66
NCLP19338 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.19■□□□□ 0.66
NCLP19338 PTCHD3P3-201ENST00000403073 906 ntBASIC19.19■□□□□ 0.66
NCLP19338 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLP19338 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLP19338 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLP19338 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.19■□□□□ 0.66
NCLP19338 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLP19338 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 AC012640.2-201ENST00000561606 901 ntBASIC19.19■□□□□ 0.66
NCLP19338 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 REXO1L3P-201ENST00000622202 1288 ntBASIC19.19■□□□□ 0.66
NCLP19338 AC107918.4-202ENST00000641623 219 ntBASIC19.19■□□□□ 0.66
NCLP19338 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.19■□□□□ 0.66
NCLP19338 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLP19338 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms