Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 AC069224.1-201ENST00000566372 1715 ntBASIC16.95■□□□□ 0.3
PTPN1P18031 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN1P18031 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN1P18031 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN1P18031 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN1P18031 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 AC114501.2-201ENST00000439631 535 ntBASIC16.94■□□□□ 0.3
PTPN1P18031 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.94■□□□□ 0.3
PTPN1P18031 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PTPN1P18031 AC138761.1-201ENST00000584393 385 ntBASIC16.94■□□□□ 0.3
PTPN1P18031 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 AC009118.2-201ENST00000613275 655 ntBASIC16.94■□□□□ 0.3
PTPN1P18031 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN1P18031 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
PTPN1P18031 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN1P18031 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN1P18031 AC011477.6-201ENST00000604980 1927 ntBASIC16.94■□□□□ 0.3
PTPN1P18031 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN1P18031 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN1P18031 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PTPN1P18031 CDC14C-201ENST00000428251 1719 ntBASIC16.93■□□□□ 0.3
PTPN1P18031 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN1P18031 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN1P18031 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN1P18031 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
PTPN1P18031 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN1P18031 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN1P18031 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN1P18031 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PTPN1P18031 AL450472.2-201ENST00000603663 1156 ntBASIC16.93■□□□□ 0.3
PTPN1P18031 LINC02084-201ENST00000606069 1096 ntBASIC16.93■□□□□ 0.3
PTPN1P18031 AC004461.2-201ENST00000629517 803 ntBASIC16.93■□□□□ 0.3
PTPN1P18031 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN1P18031 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN1P18031 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN1P18031 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN1P18031 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN1P18031 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN1P18031 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN1P18031 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms