Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 BNIP3P1-202ENST00000550043 1585 ntBASIC14.78□□□□□ -0.04
THBS1P07996 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.78□□□□□ -0.04
THBS1P07996 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS1P07996 AC005829.1-201ENST00000570002 483 ntBASIC14.78□□□□□ -0.04
THBS1P07996 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS1P07996 AL355385.1-201ENST00000606123 409 ntBASIC14.78□□□□□ -0.04
THBS1P07996 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
THBS1P07996 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS1P07996 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS1P07996 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THBS1P07996 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
THBS1P07996 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
THBS1P07996 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
THBS1P07996 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.77□□□□□ -0.04
THBS1P07996 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS1P07996 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS1P07996 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
THBS1P07996 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 TIMM8BP1-201ENST00000452384 211 ntBASIC14.77□□□□□ -0.05
THBS1P07996 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.77□□□□□ -0.05
THBS1P07996 AL139010.1-201ENST00000454878 894 ntBASIC14.77□□□□□ -0.05
THBS1P07996 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.77□□□□□ -0.05
THBS1P07996 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.77□□□□□ -0.05
THBS1P07996 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 AC027796.2-201ENST00000575326 344 ntBASIC14.77□□□□□ -0.05
THBS1P07996 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
THBS1P07996 AC026979.3-201ENST00000607315 403 ntBASIC14.77□□□□□ -0.05
THBS1P07996 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
THBS1P07996 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.77□□□□□ -0.05
THBS1P07996 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS1P07996 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS1P07996 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
THBS1P07996 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
THBS1P07996 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS1P07996 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
THBS1P07996 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.76□□□□□ -0.05
THBS1P07996 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.76□□□□□ -0.05
THBS1P07996 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
THBS1P07996 AC068418.2-201ENST00000577309 3703 ntBASIC14.76□□□□□ -0.05
THBS1P07996 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.76□□□□□ -0.05
THBS1P07996 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms