Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.04□□□□□ -0.16
SFTPBP07988 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SFTPBP07988 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
SFTPBP07988 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.04□□□□□ -0.16
SFTPBP07988 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SFTPBP07988 LINC02228-204ENST00000642115 2962 ntBASIC14.04□□□□□ -0.16
SFTPBP07988 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
SFTPBP07988 YBX2P1-201ENST00000394192 760 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.03□□□□□ -0.16
SFTPBP07988 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 MIR4515-201ENST00000584082 81 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 AC139530.3-201ENST00000620344 690 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 AC010507.1-201ENST00000633895 436 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 AC092865.6-201ENST00000642101 219 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SFTPBP07988 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 AC126177.1-201ENST00000547829 2218 ntBASIC14.03□□□□□ -0.16
SFTPBP07988 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.03□□□□□ -0.16
SFTPBP07988 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.03□□□□□ -0.16
SFTPBP07988 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SFTPBP07988 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SFTPBP07988 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.02□□□□□ -0.16
SFTPBP07988 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SFTPBP07988 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SFTPBP07988 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SFTPBP07988 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SFTPBP07988 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SFTPBP07988 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SFTPBP07988 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.02□□□□□ -0.16
SFTPBP07988 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SFTPBP07988 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SFTPBP07988 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.02□□□□□ -0.17
SFTPBP07988 HMGA1P7-201ENST00000406908 502 ntBASIC14.02□□□□□ -0.17
SFTPBP07988 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.02□□□□□ -0.17
SFTPBP07988 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 CXCL1P1-201ENST00000502804 216 ntBASIC14.02□□□□□ -0.17
SFTPBP07988 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.02□□□□□ -0.17
SFTPBP07988 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.02□□□□□ -0.17
SFTPBP07988 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.02□□□□□ -0.17
SFTPBP07988 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.02□□□□□ -0.17
SFTPBP07988 AL513190.1-201ENST00000621254 727 ntBASIC14.02□□□□□ -0.17
SFTPBP07988 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms