Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRGV3P03979 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV3P03979 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 AL161772.1-201ENST00000610494 4412 ntBASIC12.68□□□□□ -0.38
TRGV3P03979 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV3P03979 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV3P03979 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV3P03979 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV3P03979 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
TRGV3P03979 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.68□□□□□ -0.38
TRGV3P03979 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.68□□□□□ -0.38
TRGV3P03979 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV3P03979 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TRGV3P03979 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRGV3P03979 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 AL353705.2-201ENST00000428243 662 ntBASIC12.67□□□□□ -0.38
TRGV3P03979 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.67□□□□□ -0.38
TRGV3P03979 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.67□□□□□ -0.38
TRGV3P03979 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV3P03979 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 MIR6080-201ENST00000617359 66 ntBASIC12.67□□□□□ -0.38
TRGV3P03979 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 HYMAI-201ENST00000635591 3347 ntBASIC12.67□□□□□ -0.38
TRGV3P03979 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV3P03979 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV3P03979 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV3P03979 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV3P03979 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV3P03979 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV3P03979 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV3P03979 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.66□□□□□ -0.38
TRGV3P03979 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRGV3P03979 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.66□□□□□ -0.38
TRGV3P03979 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV3P03979 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.66□□□□□ -0.38
TRGV3P03979 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV3P03979 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms