Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMP1P01033 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMP1P01033 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMP1P01033 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMP1P01033 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMP1P01033 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TIMP1P01033 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.08■□□□□ 0.32
TIMP1P01033 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMP1P01033 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TIMP1P01033 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP1P01033 AL138799.1-201ENST00000448213 1675 ntBASIC17.07■□□□□ 0.32
TIMP1P01033 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMP1P01033 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 TMEM198B-204ENST00000484016 896 ntBASIC17.07■□□□□ 0.32
TIMP1P01033 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.07■□□□□ 0.32
TIMP1P01033 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.07■□□□□ 0.32
TIMP1P01033 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMP1P01033 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.07■□□□□ 0.32
TIMP1P01033 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.07■□□□□ 0.32
TIMP1P01033 BX539320.1-201ENST00000623759 877 ntBASIC17.07■□□□□ 0.32
TIMP1P01033 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.07■□□□□ 0.32
TIMP1P01033 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMP1P01033 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TIMP1P01033 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMP1P01033 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TIMP1P01033 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP1P01033 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP1P01033 AC253536.4-201ENST00000440539 267 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 CNN2P10-201ENST00000443067 918 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 HSPB1P2-201ENST00000448722 546 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 RPS2P36-201ENST00000456516 831 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 IMP3P2-201ENST00000489760 475 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP1P01033 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.06■□□□□ 0.32
TIMP1P01033 AC097724.1-201ENST00000609581 426 ntBASIC17.06■□□□□ 0.32
TIMP1P01033 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TIMP1P01033 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMP1P01033 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TIMP1P01033 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms