Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SIX6O95475 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.5□□□□□ -0.25
SIX6O95475 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.49□□□□□ -0.25
SIX6O95475 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SIX6O95475 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SIX6O95475 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SIX6O95475 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 AL845331.1-201ENST00000424978 1190 ntBASIC13.49□□□□□ -0.25
SIX6O95475 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.49□□□□□ -0.25
SIX6O95475 AC090192.1-201ENST00000517740 490 ntBASIC13.49□□□□□ -0.25
SIX6O95475 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 MIR4785-201ENST00000585005 73 ntBASIC13.49□□□□□ -0.25
SIX6O95475 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SIX6O95475 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.49□□□□□ -0.25
SIX6O95475 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SIX6O95475 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 AC009090.5-201ENST00000624886 2285 ntBASIC13.48□□□□□ -0.25
SIX6O95475 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 STARP1-201ENST00000397973 869 ntBASIC13.48□□□□□ -0.25
SIX6O95475 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 AL158047.1-201ENST00000445918 881 ntBASIC13.48□□□□□ -0.25
SIX6O95475 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 AL355075.4-201ENST00000554988 638 ntBASIC13.48□□□□□ -0.25
SIX6O95475 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 AC124864.1-201ENST00000623408 392 ntBASIC13.48□□□□□ -0.25
SIX6O95475 AC140479.7-201ENST00000636301 2332 ntBASIC13.48□□□□□ -0.25
SIX6O95475 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
SIX6O95475 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SIX6O95475 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SIX6O95475 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SIX6O95475 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 INTS4P1-203ENST00000641008 3683 ntBASIC13.48□□□□□ -0.25
SIX6O95475 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SIX6O95475 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.47□□□□□ -0.25
SIX6O95475 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
SIX6O95475 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SIX6O95475 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms