Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH8O95206 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH8O95206 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
PCDH8O95206 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16■□□□□ 0.15
PCDH8O95206 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16■□□□□ 0.15
PCDH8O95206 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16■□□□□ 0.15
PCDH8O95206 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16■□□□□ 0.15
PCDH8O95206 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16■□□□□ 0.15
PCDH8O95206 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 AC074044.1-201ENST00000609673 707 ntBASIC16■□□□□ 0.15
PCDH8O95206 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH8O95206 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDH8O95206 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 KRT8P37-201ENST00000451609 1420 ntBASIC16■□□□□ 0.15
PCDH8O95206 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH8O95206 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
PCDH8O95206 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH8O95206 AL391825.1-201ENST00000457671 1364 ntBASIC16■□□□□ 0.15
PCDH8O95206 PCDHA14-201ENST00000506751 2298 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 AC124067.4-201ENST00000519691 2379 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH8O95206 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 HAUS4P1-201ENST00000406739 1145 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 HIST3H2BA-201ENST00000436555 524 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH8O95206 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
PCDH8O95206 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH8O95206 AC025048.3-201ENST00000590609 569 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 AC004790.1-201ENST00000612686 536 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH8O95206 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 AC005702.4-201ENST00000618393 416 ntBASIC15.99■□□□□ 0.15
PCDH8O95206 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH8O95206 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH8O95206 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH8O95206 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH8O95206 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms