Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RFPL1O75677 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 LINC02228-204ENST00000642115 2962 ntBASIC16.13■□□□□ 0.17
RFPL1O75677 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL1O75677 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RFPL1O75677 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 ACTG1P14-201ENST00000446382 1122 ntBASIC16.12■□□□□ 0.17
RFPL1O75677 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.12■□□□□ 0.17
RFPL1O75677 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 AC109635.5-201ENST00000533593 962 ntBASIC16.12■□□□□ 0.17
RFPL1O75677 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RFPL1O75677 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 AC092364.2-202ENST00000597012 1073 ntBASIC16.12■□□□□ 0.17
RFPL1O75677 AL365330.1-201ENST00000607459 531 ntBASIC16.12■□□□□ 0.17
RFPL1O75677 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.12■□□□□ 0.17
RFPL1O75677 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.12■□□□□ 0.17
RFPL1O75677 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 FER1L4-210ENST00000615531 5998 ntBASIC16.12■□□□□ 0.17
RFPL1O75677 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFPL1O75677 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.12■□□□□ 0.17
RFPL1O75677 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 AL589702.1-201ENST00000641229 1509 ntBASIC16.11■□□□□ 0.17
RFPL1O75677 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.11■□□□□ 0.17
RFPL1O75677 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.11■□□□□ 0.17
RFPL1O75677 KRT19P2-202ENST00000557173 1012 ntBASIC16.11■□□□□ 0.17
RFPL1O75677 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.11■□□□□ 0.17
RFPL1O75677 AC011467.4-201ENST00000594891 528 ntBASIC16.11■□□□□ 0.17
RFPL1O75677 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.11■□□□□ 0.17
RFPL1O75677 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFPL1O75677 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.11■□□□□ 0.17
RFPL1O75677 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
RFPL1O75677 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.1■□□□□ 0.17
RFPL1O75677 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFPL1O75677 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms