Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
PMPCBO75439 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PMPCBO75439 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMPCBO75439 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PMPCBO75439 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PMPCBO75439 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.33■□□□□ 0.2
PMPCBO75439 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PMPCBO75439 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
PMPCBO75439 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.32■□□□□ 0.2
PMPCBO75439 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PMPCBO75439 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PMPCBO75439 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 GPS2P2-201ENST00000430745 888 ntBASIC16.32■□□□□ 0.2
PMPCBO75439 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.32■□□□□ 0.2
PMPCBO75439 DNAJB3-202ENST00000449667 1266 ntBASIC16.32■□□□□ 0.2
PMPCBO75439 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.32■□□□□ 0.2
PMPCBO75439 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
PMPCBO75439 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.32■□□□□ 0.2
PMPCBO75439 AL691403.2-201ENST00000618460 490 ntBASIC16.32■□□□□ 0.2
PMPCBO75439 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PMPCBO75439 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.32■□□□□ 0.2
PMPCBO75439 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PMPCBO75439 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 AL136982.4-201ENST00000437689 1740 ntBASIC16.31■□□□□ 0.2
PMPCBO75439 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 AL691432.1-201ENST00000596308 1422 ntBASIC16.31■□□□□ 0.2
PMPCBO75439 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.31■□□□□ 0.2
PMPCBO75439 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.31■□□□□ 0.2
PMPCBO75439 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 AC009093.7-201ENST00000623853 1223 ntBASIC16.31■□□□□ 0.2
PMPCBO75439 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.31■□□□□ 0.2
PMPCBO75439 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMPCBO75439 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.31■□□□□ 0.2
PMPCBO75439 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.3■□□□□ 0.2
PMPCBO75439 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PMPCBO75439 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PMPCBO75439 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMPCBO75439 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PMPCBO75439 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms