Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM3O75382 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.04■□□□□ -0
TRIM3O75382 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 AC073439.1-201ENST00000624121 1774 ntBASIC15.03■□□□□ -0
TRIM3O75382 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.03■□□□□ -0
TRIM3O75382 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.03■□□□□ -0
TRIM3O75382 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRIM3O75382 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 RBPMS2P1-201ENST00000437762 623 ntBASIC15.03■□□□□ -0
TRIM3O75382 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.03■□□□□ -0
TRIM3O75382 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.03■□□□□ -0
TRIM3O75382 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.03■□□□□ -0
TRIM3O75382 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.03■□□□□ -0
TRIM3O75382 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.03■□□□□ -0
TRIM3O75382 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.03■□□□□ -0
TRIM3O75382 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRIM3O75382 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM3O75382 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 NORAD-201ENST00000565493 5339 ntBASIC15.03■□□□□ -0
TRIM3O75382 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM3O75382 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 AC006058.4-201ENST00000624016 1670 ntBASIC15.03■□□□□ -0
TRIM3O75382 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM3O75382 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM3O75382 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRIM3O75382 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRIM3O75382 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.02■□□□□ -0
TRIM3O75382 RFPL4AP1-201ENST00000530883 850 ntBASIC15.02■□□□□ -0
TRIM3O75382 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.02■□□□□ -0
TRIM3O75382 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.02■□□□□ -0
TRIM3O75382 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM3O75382 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.02■□□□□ -0
TRIM3O75382 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM3O75382 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM3O75382 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
TRIM3O75382 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRIM3O75382 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
TRIM3O75382 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM3O75382 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms